Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Gm9988-201ENSMUST00000069786 435 ntBASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lnp1A0A1B0GSK3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Lnp1A0A1B0GSK3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lnp1A0A1B0GSK3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lnp1A0A1B0GSK3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lnp1A0A1B0GSK3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.59■□□□□ 0.09
Lnp1A0A1B0GSK3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lnp1A0A1B0GSK3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Lnp1A0A1B0GSK3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lnp1A0A1B0GSK3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Lnp1A0A1B0GSK3 Reep4-203ENSMUST00000226563 1444 ntBASIC15.59■□□□□ 0.09
Lnp1A0A1B0GSK3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Lnp1A0A1B0GSK3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lnp1A0A1B0GSK3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lnp1A0A1B0GSK3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lnp1A0A1B0GSK3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lnp1A0A1B0GSK3 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.58■□□□□ 0.08
Lnp1A0A1B0GSK3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.58■□□□□ 0.08
Lnp1A0A1B0GSK3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.58■□□□□ 0.08
Lnp1A0A1B0GSK3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Lnp1A0A1B0GSK3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lnp1A0A1B0GSK3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lnp1A0A1B0GSK3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.58■□□□□ 0.08
Lnp1A0A1B0GSK3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lnp1A0A1B0GSK3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.58■□□□□ 0.08
Lnp1A0A1B0GSK3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 BC021767-201ENSMUST00000126387 1716 ntBASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lnp1A0A1B0GSK3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lnp1A0A1B0GSK3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lnp1A0A1B0GSK3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
Lnp1A0A1B0GSK3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.56■□□□□ 0.08
Lnp1A0A1B0GSK3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lnp1A0A1B0GSK3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Lnp1A0A1B0GSK3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lnp1A0A1B0GSK3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lnp1A0A1B0GSK3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Lnp1A0A1B0GSK3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lnp1A0A1B0GSK3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.56■□□□□ 0.08
Lnp1A0A1B0GSK3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lnp1A0A1B0GSK3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lnp1A0A1B0GSK3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Lnp1A0A1B0GSK3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lnp1A0A1B0GSK3 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms