Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc194A0A140LIT1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc194A0A140LIT1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc194A0A140LIT1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc194A0A140LIT1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc194A0A140LIT1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc194A0A140LIT1 Gm27801-201ENSMUST00000184174 223 ntBASIC18.65■□□□□ 0.58
Ccdc194A0A140LIT1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc194A0A140LIT1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc194A0A140LIT1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc194A0A140LIT1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ccdc194A0A140LIT1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc194A0A140LIT1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Gm43173-201ENSMUST00000202246 593 ntBASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc194A0A140LIT1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc194A0A140LIT1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Gm7860-201ENSMUST00000121190 879 ntBASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Gm27454-201ENSMUST00000185090 204 ntBASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc194A0A140LIT1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc194A0A140LIT1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms