Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhgb8A0A140LI48 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhgb8A0A140LI48 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhgb8A0A140LI48 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhgb8A0A140LI48 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhgb8A0A140LI48 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhgb8A0A140LI48 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhgb8A0A140LI48 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb8A0A140LI48 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb8A0A140LI48 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.86■□□□□ 0.29
Pcdhgb8A0A140LI48 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Smad6-203ENSMUST00000179458 273 ntBASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb8A0A140LI48 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Gm43060-201ENSMUST00000200621 289 ntBASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhgb8A0A140LI48 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgb8A0A140LI48 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgb8A0A140LI48 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgb8A0A140LI48 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgb8A0A140LI48 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb8A0A140LI48 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms