Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Gm7514-201ENSMUST00000209475 934 ntBASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Gm38205-201ENSMUST00000192243 258 ntBASIC13.52□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Golph3-205ENSMUST00000228671 2842 ntBASIC13.52□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms