Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Gm42501-201ENSMUST00000200220 1026 ntBASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Gm15820-201ENSMUST00000201566 728 ntBASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav11A0A0B4J1J9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Grk6-206ENSMUST00000224995 2971 ntBASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav11A0A0B4J1J9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav11A0A0B4J1J9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav11A0A0B4J1J9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav11A0A0B4J1J9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms