Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Gm20049-201ENSMUST00000219950 730 ntBASIC19.23■□□□□ 0.67
Igkv5-43A0A0B4J1J2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.23■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.21■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.21■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Notumos-201ENSMUST00000151998 2659 ntBASIC19.21■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Gm10653-202ENSMUST00000139570 835 ntBASIC19.2■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.19■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.19■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv5-43A0A0B4J1J2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Gm44549-201ENSMUST00000208351 577 ntBASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Igkv5-43A0A0B4J1J2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms