Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Trbv15A0A0A6YYE3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv15A0A0A6YYE3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv15A0A0A6YYE3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv15A0A0A6YYE3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv15A0A0A6YYE3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbv15A0A0A6YYE3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.55■□□□□ 0.08
Trbv15A0A0A6YYE3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv15A0A0A6YYE3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv15A0A0A6YYE3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv15A0A0A6YYE3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv15A0A0A6YYE3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv15A0A0A6YYE3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Trbv15A0A0A6YYE3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trbv15A0A0A6YYE3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trbv15A0A0A6YYE3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trbv15A0A0A6YYE3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trbv15A0A0A6YYE3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trbv15A0A0A6YYE3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv15A0A0A6YYE3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv15A0A0A6YYE3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trbv15A0A0A6YYE3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv15A0A0A6YYE3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv15A0A0A6YYE3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv15A0A0A6YYE3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv15A0A0A6YYE3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv15A0A0A6YYE3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv15A0A0A6YYE3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv15A0A0A6YYE3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.51■□□□□ 0.07
Trbv15A0A0A6YYE3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv15A0A0A6YYE3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv15A0A0A6YYE3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv15A0A0A6YYE3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
Trbv15A0A0A6YYE3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv15A0A0A6YYE3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Trbv15A0A0A6YYE3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv15A0A0A6YYE3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trbv15A0A0A6YYE3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trbv15A0A0A6YYE3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms