Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Grk6-206ENSMUST00000224995 2971 ntBASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Gm45417-201ENSMUST00000209533 758 ntBASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-4A0A075B652 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-4A0A075B652 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav5-4A0A075B652 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav5-4A0A075B652 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav5-4A0A075B652 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trav5-4A0A075B652 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Gm6139-201ENSMUST00000079261 882 ntBASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.58■□□□□ 0.08
Trav5-4A0A075B652 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Trav5-4A0A075B652 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav5-4A0A075B652 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms