Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm12922-201ENSMUST00000120626 809 ntBASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-4-dv10A0A075B651 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-4-dv10A0A075B651 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav4-4-dv10A0A075B651 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.58□□□□□ -0.07
Trav4-4-dv10A0A075B651 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Trav4-4-dv10A0A075B651 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav4-4-dv10A0A075B651 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav4-4-dv10A0A075B651 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-4-dv10A0A075B651 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm45102-201ENSMUST00000207427 857 ntBASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 Spcs1-204ENSMUST00000226782 949 ntBASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-4-dv10A0A075B651 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 Rarb-207ENSMUST00000225921 2756 ntBASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.56□□□□□ -0.08
Trav4-4-dv10A0A075B651 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms