Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-1A0A075B644 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Gm10602-201ENSMUST00000098239 609 ntBASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-1A0A075B644 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-1A0A075B644 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-1A0A075B644 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13-1A0A075B644 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13-1A0A075B644 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13-1A0A075B644 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav13-1A0A075B644 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-1A0A075B644 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms