Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16nA0A075B634 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16nA0A075B634 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16nA0A075B634 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16nA0A075B634 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16nA0A075B634 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Gm7417-201ENSMUST00000192950 473 ntBASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16nA0A075B634 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16nA0A075B634 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16nA0A075B634 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms