Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9n-4A0A075B631 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9n-4A0A075B631 BC021767-201ENSMUST00000126387 1716 ntBASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9n-4A0A075B631 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Gm13241-201ENSMUST00000094493 780 ntBASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Gm38342-201ENSMUST00000195710 2980 ntBASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9n-4A0A075B631 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9n-4A0A075B631 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9n-4A0A075B631 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9n-4A0A075B631 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9n-4A0A075B631 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9n-4A0A075B631 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9n-4A0A075B631 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.77□□□□□ -0.36
Trav9n-4A0A075B631 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-4A0A075B631 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-4A0A075B631 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.77□□□□□ -0.37
Trav9n-4A0A075B631 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-4A0A075B631 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-4A0A075B631 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-4A0A075B631 Gm12251-201ENSMUST00000117893 792 ntBASIC12.77□□□□□ -0.37
Trav9n-4A0A075B631 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav9n-4A0A075B631 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav9n-4A0A075B631 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.77□□□□□ -0.37
Trav9n-4A0A075B631 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-4A0A075B631 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-4A0A075B631 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms