Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Golgb1-201ENSMUST00000023534 498 ntBASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.91■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Grk6-206ENSMUST00000224995 2971 ntBASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-1-dv6d-1A0A075B624 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav15d-1-dv6d-1A0A075B624 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms