Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7n-4A0A075B620 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7n-4A0A075B620 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav7n-4A0A075B620 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav7n-4A0A075B620 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav7n-4A0A075B620 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav7n-4A0A075B620 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav7n-4A0A075B620 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav7n-4A0A075B620 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav7n-4A0A075B620 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav7n-4A0A075B620 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav7n-4A0A075B620 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms