Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 AA386476-201ENSMUST00000098781 1665 ntBASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4n-4A0A075B615 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4n-4A0A075B615 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav4n-4A0A075B615 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.02□□□□□ -0.32
Trav4n-4A0A075B615 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4n-4A0A075B615 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4n-4A0A075B615 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4n-4A0A075B615 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4n-4A0A075B615 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.02□□□□□ -0.33
Trav4n-4A0A075B615 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4n-4A0A075B615 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms