Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-6A0A075B603 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trav6-6A0A075B603 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-6A0A075B603 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Gm14117-201ENSMUST00000122417 843 ntBASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-6A0A075B603 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-6A0A075B603 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms