Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-1A0A075B601 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-1A0A075B601 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Gm27454-201ENSMUST00000185090 204 ntBASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Gm43173-201ENSMUST00000202246 593 ntBASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-1A0A075B601 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.59□□□□□ -0.07
Trav9-1A0A075B601 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9-1A0A075B601 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9-1A0A075B601 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.58□□□□□ -0.07
Trav9-1A0A075B601 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9-1A0A075B601 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Gm12821-201ENSMUST00000120022 600 ntBASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-1A0A075B601 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-1A0A075B601 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav9-1A0A075B601 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-1A0A075B601 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Trav9-1A0A075B601 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-1A0A075B601 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-1A0A075B601 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav9-1A0A075B601 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms