Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-1A0A075B5Z8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Gm12922-201ENSMUST00000120626 809 ntBASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-1A0A075B5Z8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-1A0A075B5Z8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6-1A0A075B5Z8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 Spcs1-204ENSMUST00000226782 949 ntBASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav6-1A0A075B5Z8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav6-1A0A075B5Z8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-1A0A075B5Z8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.02□□□□□ -0.01
Trav6-1A0A075B5Z8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-1A0A075B5Z8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6-1A0A075B5Z8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6-1A0A075B5Z8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms