Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav5-1A0A075B5Z7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Gm5408-201ENSMUST00000197998 747 ntBASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-1A0A075B5Z7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Gm13148-201ENSMUST00000118892 745 ntBASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav5-1A0A075B5Z7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-1A0A075B5Z7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-1A0A075B5Z7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-1A0A075B5Z7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-1A0A075B5Z7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav5-1A0A075B5Z7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-1A0A075B5Z7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-1A0A075B5Z7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-1A0A075B5Z7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-1A0A075B5Z7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-1A0A075B5Z7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav5-1A0A075B5Z7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav5-1A0A075B5Z7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav5-1A0A075B5Z7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-1A0A075B5Z7 Gm12441-201ENSMUST00000121806 588 ntBASIC16.08■□□□□ 0.16
Trav5-1A0A075B5Z7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.08■□□□□ 0.16
Trav5-1A0A075B5Z7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-1A0A075B5Z7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-1A0A075B5Z7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Trav5-1A0A075B5Z7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-1A0A075B5Z7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-1A0A075B5Z7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-1A0A075B5Z7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-1A0A075B5Z7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Trav5-1A0A075B5Z7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav5-1A0A075B5Z7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 Gm4968-201ENSMUST00000071458 858 ntBASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms