Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav1A0A075B5Z4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav1A0A075B5Z4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav1A0A075B5Z4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav1A0A075B5Z4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav1A0A075B5Z4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.46■□□□□ 0.39
Trav1A0A075B5Z4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav1A0A075B5Z4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav1A0A075B5Z4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav1A0A075B5Z4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav1A0A075B5Z4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav1A0A075B5Z4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav1A0A075B5Z4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav1A0A075B5Z4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav1A0A075B5Z4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav1A0A075B5Z4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav1A0A075B5Z4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trav1A0A075B5Z4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav1A0A075B5Z4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav1A0A075B5Z4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.43■□□□□ 0.38
Trav1A0A075B5Z4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav1A0A075B5Z4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav1A0A075B5Z4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav1A0A075B5Z4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav1A0A075B5Z4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav1A0A075B5Z4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav1A0A075B5Z4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav1A0A075B5Z4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms