Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.39□□□□□ -0.11
PdfS4R2K0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PdfS4R2K0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdfS4R2K0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdfS4R2K0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdfS4R2K0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdfS4R2K0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PdfS4R2K0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdfS4R2K0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PdfS4R2K0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PdfS4R2K0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PdfS4R2K0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PdfS4R2K0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PdfS4R2K0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdfS4R2K0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.38□□□□□ -0.11
PdfS4R2K0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdfS4R2K0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdfS4R2K0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdfS4R2K0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.38□□□□□ -0.11
PdfS4R2K0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PdfS4R2K0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdfS4R2K0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PdfS4R2K0 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.37□□□□□ -0.11
PdfS4R2K0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdfS4R2K0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.37□□□□□ -0.11
PdfS4R2K0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdfS4R2K0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.37□□□□□ -0.11
PdfS4R2K0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.37□□□□□ -0.11
PdfS4R2K0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PdfS4R2K0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdfS4R2K0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PdfS4R2K0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdfS4R2K0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdfS4R2K0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdfS4R2K0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PdfS4R2K0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdfS4R2K0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdfS4R2K0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PdfS4R2K0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.36□□□□□ -0.11
PdfS4R2K0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdfS4R2K0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.36□□□□□ -0.11
PdfS4R2K0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
PdfS4R2K0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdfS4R2K0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdfS4R2K0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PdfS4R2K0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.36□□□□□ -0.11
PdfS4R2K0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PdfS4R2K0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PdfS4R2K0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.36□□□□□ -0.11
PdfS4R2K0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdfS4R2K0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdfS4R2K0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdfS4R2K0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PdfS4R2K0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdfS4R2K0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdfS4R2K0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.35□□□□□ -0.11
PdfS4R2K0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdfS4R2K0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
PdfS4R2K0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdfS4R2K0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PdfS4R2K0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PdfS4R2K0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdfS4R2K0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PdfS4R2K0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PdfS4R2K0 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.34□□□□□ -0.11
PdfS4R2K0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PdfS4R2K0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.34□□□□□ -0.11
PdfS4R2K0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.34□□□□□ -0.11
PdfS4R2K0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PdfS4R2K0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PdfS4R2K0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms