Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac6Q9Z2V5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac6Q9Z2V5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac6Q9Z2V5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Gm11643-201ENSMUST00000119578 864 ntBASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac6Q9Z2V5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Hdac6Q9Z2V5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Hdac6Q9Z2V5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hdac6Q9Z2V5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Hdac6Q9Z2V5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hdac6Q9Z2V5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hdac6Q9Z2V5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac6Q9Z2V5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac6Q9Z2V5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac6Q9Z2V5 Gm45640-201ENSMUST00000210665 1896 ntBASIC23.75■■□□□ 1.39
Hdac6Q9Z2V5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
Hdac6Q9Z2V5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac6Q9Z2V5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC23.75■■□□□ 1.39
Hdac6Q9Z2V5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC23.75■■□□□ 1.39
Hdac6Q9Z2V5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC23.75■■□□□ 1.39
Hdac6Q9Z2V5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac6Q9Z2V5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hdac6Q9Z2V5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.74■■□□□ 1.39
Hdac6Q9Z2V5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hdac6Q9Z2V5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Hdac6Q9Z2V5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Hdac6Q9Z2V5 Gm11927-201ENSMUST00000118472 759 ntBASIC23.74■■□□□ 1.39
Hdac6Q9Z2V5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC23.74■■□□□ 1.39
Hdac6Q9Z2V5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hdac6Q9Z2V5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.74■■□□□ 1.39
Hdac6Q9Z2V5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac6Q9Z2V5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.73■■□□□ 1.39
Hdac6Q9Z2V5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac6Q9Z2V5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac6Q9Z2V5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC23.73■■□□□ 1.39
Hdac6Q9Z2V5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac6Q9Z2V5 Mir5122-201ENSMUST00000175004 89 ntBASIC23.73■■□□□ 1.39
Hdac6Q9Z2V5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac6Q9Z2V5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac6Q9Z2V5 Gm9987-201ENSMUST00000069768 567 ntBASIC23.73■■□□□ 1.39
Hdac6Q9Z2V5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac6Q9Z2V5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac6Q9Z2V5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Gm20472-201ENSMUST00000174403 1240 ntBASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Alkbh1-212ENSMUST00000185301 408 ntBASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Gm5540-201ENSMUST00000131852 1848 ntBASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Hdac6Q9Z2V5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hdac6Q9Z2V5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hdac6Q9Z2V5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Hdac6Q9Z2V5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hdac6Q9Z2V5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Hdac6Q9Z2V5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Hdac6Q9Z2V5 Flg-201ENSMUST00000050758 1488 ntBASIC23.71■■□□□ 1.39
Hdac6Q9Z2V5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.71■■□□□ 1.39
Hdac6Q9Z2V5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hdac6Q9Z2V5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hdac6Q9Z2V5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Hdac6Q9Z2V5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
Hdac6Q9Z2V5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Hdac6Q9Z2V5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hdac6Q9Z2V5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hdac6Q9Z2V5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hdac6Q9Z2V5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC23.7■■□□□ 1.38
Hdac6Q9Z2V5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Hdac6Q9Z2V5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Hdac6Q9Z2V5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms