Protein–RNA interactions for Protein: Q9WUP1

Ramp3, Receptor activity-modifying protein 3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ramp3Q9WUP1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ramp3Q9WUP1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ramp3Q9WUP1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ramp3Q9WUP1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ramp3Q9WUP1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ramp3Q9WUP1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ramp3Q9WUP1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Ramp3Q9WUP1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ramp3Q9WUP1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.78■□□□□ 0.28
Ramp3Q9WUP1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ramp3Q9WUP1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ramp3Q9WUP1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ramp3Q9WUP1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ramp3Q9WUP1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ramp3Q9WUP1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ramp3Q9WUP1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Ramp3Q9WUP1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ramp3Q9WUP1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ramp3Q9WUP1 Gm8520-201ENSMUST00000186517 868 ntBASIC16.77■□□□□ 0.28
Ramp3Q9WUP1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.77■□□□□ 0.28
Ramp3Q9WUP1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ramp3Q9WUP1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ramp3Q9WUP1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.77■□□□□ 0.28
Ramp3Q9WUP1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ramp3Q9WUP1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ramp3Q9WUP1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ramp3Q9WUP1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ramp3Q9WUP1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ramp3Q9WUP1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ramp3Q9WUP1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ramp3Q9WUP1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ramp3Q9WUP1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ramp3Q9WUP1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ramp3Q9WUP1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ramp3Q9WUP1 Gm37856-201ENSMUST00000191634 999 ntBASIC16.74■□□□□ 0.27
Ramp3Q9WUP1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.74■□□□□ 0.27
Ramp3Q9WUP1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ramp3Q9WUP1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ramp3Q9WUP1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.74■□□□□ 0.27
Ramp3Q9WUP1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ramp3Q9WUP1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ramp3Q9WUP1 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.73■□□□□ 0.27
Ramp3Q9WUP1 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.73■□□□□ 0.27
Ramp3Q9WUP1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ramp3Q9WUP1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ramp3Q9WUP1 Gm22240-201ENSMUST00000175225 82 ntBASIC16.73■□□□□ 0.27
Ramp3Q9WUP1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ramp3Q9WUP1 Golph3-202ENSMUST00000226517 2359 ntBASIC16.73■□□□□ 0.27
Ramp3Q9WUP1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ramp3Q9WUP1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.73■□□□□ 0.27
Ramp3Q9WUP1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ramp3Q9WUP1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ramp3Q9WUP1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ramp3Q9WUP1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Ramp3Q9WUP1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.72■□□□□ 0.27
Ramp3Q9WUP1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms