Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.08■□□□□ 0.64
Scn8aQ9WTU3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn8aQ9WTU3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn8aQ9WTU3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.07■□□□□ 0.64
Scn8aQ9WTU3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Scn8aQ9WTU3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Scn8aQ9WTU3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn8aQ9WTU3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn8aQ9WTU3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn8aQ9WTU3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn8aQ9WTU3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn8aQ9WTU3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn8aQ9WTU3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn8aQ9WTU3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 Gm10653-202ENSMUST00000139570 835 ntBASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 Gm12527-201ENSMUST00000117967 564 ntBASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn8aQ9WTU3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Scn8aQ9WTU3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn8aQ9WTU3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn8aQ9WTU3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.03■□□□□ 0.64
Scn8aQ9WTU3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn8aQ9WTU3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.03■□□□□ 0.64
Scn8aQ9WTU3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Scn8aQ9WTU3 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.03■□□□□ 0.64
Scn8aQ9WTU3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn8aQ9WTU3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn8aQ9WTU3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn8aQ9WTU3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Scn8aQ9WTU3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.02■□□□□ 0.64
Scn8aQ9WTU3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.02■□□□□ 0.64
Scn8aQ9WTU3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn8aQ9WTU3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scn8aQ9WTU3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Scn8aQ9WTU3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Scn8aQ9WTU3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scn8aQ9WTU3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn8aQ9WTU3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Scn8aQ9WTU3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn8aQ9WTU3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Scn8aQ9WTU3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn8aQ9WTU3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn8aQ9WTU3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn8aQ9WTU3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn8aQ9WTU3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn8aQ9WTU3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn8aQ9WTU3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn8aQ9WTU3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Scn8aQ9WTU3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.01■□□□□ 0.63
Scn8aQ9WTU3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn8aQ9WTU3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn8aQ9WTU3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.01■□□□□ 0.63
Scn8aQ9WTU3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Scn8aQ9WTU3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn8aQ9WTU3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19■□□□□ 0.63
Scn8aQ9WTU3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
Scn8aQ9WTU3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn8aQ9WTU3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn8aQ9WTU3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn8aQ9WTU3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn8aQ9WTU3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms