Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tubd1Q9R1K7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Tubd1Q9R1K7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubd1Q9R1K7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubd1Q9R1K7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tubd1Q9R1K7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Golph3-205ENSMUST00000228671 2842 ntBASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Tubd1Q9R1K7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubd1Q9R1K7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Gm7514-201ENSMUST00000209475 934 ntBASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubd1Q9R1K7 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.22■□□□□ 0.67
Tubd1Q9R1K7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubd1Q9R1K7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubd1Q9R1K7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubd1Q9R1K7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubd1Q9R1K7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubd1Q9R1K7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubd1Q9R1K7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubd1Q9R1K7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubd1Q9R1K7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubd1Q9R1K7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Gm6420-201ENSMUST00000193885 723 ntBASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tubd1Q9R1K7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tubd1Q9R1K7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tubd1Q9R1K7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tubd1Q9R1K7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tubd1Q9R1K7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Tubd1Q9R1K7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms