Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcf1Q9QZM3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcf1Q9QZM3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcf1Q9QZM3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcf1Q9QZM3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcf1Q9QZM3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Clcf1Q9QZM3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Gm13146-201ENSMUST00000118508 780 ntBASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Gm38205-201ENSMUST00000192243 258 ntBASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.03■□□□□ 0.32
Clcf1Q9QZM3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clcf1Q9QZM3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clcf1Q9QZM3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clcf1Q9QZM3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clcf1Q9QZM3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clcf1Q9QZM3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clcf1Q9QZM3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17■□□□□ 0.31
Clcf1Q9QZM3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17■□□□□ 0.31
Clcf1Q9QZM3 Gm7514-201ENSMUST00000209475 934 ntBASIC17■□□□□ 0.31
Clcf1Q9QZM3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcf1Q9QZM3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Clcf1Q9QZM3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17■□□□□ 0.31
Clcf1Q9QZM3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17■□□□□ 0.31
Clcf1Q9QZM3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17■□□□□ 0.31
Clcf1Q9QZM3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clcf1Q9QZM3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcf1Q9QZM3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clcf1Q9QZM3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcf1Q9QZM3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcf1Q9QZM3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Clcf1Q9QZM3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.99■□□□□ 0.31
Clcf1Q9QZM3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcf1Q9QZM3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.99■□□□□ 0.31
Clcf1Q9QZM3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.99■□□□□ 0.31
Clcf1Q9QZM3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcf1Q9QZM3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clcf1Q9QZM3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.99■□□□□ 0.31
Clcf1Q9QZM3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcf1Q9QZM3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Clcf1Q9QZM3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcf1Q9QZM3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Clcf1Q9QZM3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Clcf1Q9QZM3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcf1Q9QZM3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcf1Q9QZM3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.98■□□□□ 0.31
Clcf1Q9QZM3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcf1Q9QZM3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcf1Q9QZM3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.98■□□□□ 0.31
Clcf1Q9QZM3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clcf1Q9QZM3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Clcf1Q9QZM3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcf1Q9QZM3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Clcf1Q9QZM3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcf1Q9QZM3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcf1Q9QZM3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcf1Q9QZM3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clcf1Q9QZM3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.97■□□□□ 0.31
Clcf1Q9QZM3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcf1Q9QZM3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms