Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Phtf1Q9QZ09 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Phtf1Q9QZ09 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.71■□□□□ 0.91
Phtf1Q9QZ09 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Phtf1Q9QZ09 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Phtf1Q9QZ09 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Phtf1Q9QZ09 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Phtf1Q9QZ09 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Phtf1Q9QZ09 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Phtf1Q9QZ09 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Phtf1Q9QZ09 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Phtf1Q9QZ09 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Phtf1Q9QZ09 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Phtf1Q9QZ09 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Phtf1Q9QZ09 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.69■□□□□ 0.9
Phtf1Q9QZ09 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Phtf1Q9QZ09 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Phtf1Q9QZ09 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Phtf1Q9QZ09 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Phtf1Q9QZ09 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Phtf1Q9QZ09 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Phtf1Q9QZ09 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Phtf1Q9QZ09 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Phtf1Q9QZ09 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Phtf1Q9QZ09 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Phtf1Q9QZ09 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Phtf1Q9QZ09 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Phtf1Q9QZ09 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.68■□□□□ 0.9
Phtf1Q9QZ09 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Phtf1Q9QZ09 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Phtf1Q9QZ09 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.68■□□□□ 0.9
Phtf1Q9QZ09 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Phtf1Q9QZ09 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Phtf1Q9QZ09 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Phtf1Q9QZ09 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Phtf1Q9QZ09 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Phtf1Q9QZ09 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Phtf1Q9QZ09 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Phtf1Q9QZ09 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Phtf1Q9QZ09 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.67■□□□□ 0.9
Phtf1Q9QZ09 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Phtf1Q9QZ09 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Phtf1Q9QZ09 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.67■□□□□ 0.9
Phtf1Q9QZ09 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Phtf1Q9QZ09 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Phtf1Q9QZ09 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Phtf1Q9QZ09 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Phtf1Q9QZ09 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms