Protein–RNA interactions for Protein: Q9QY39

Pdzd4, PDZ domain-containing protein 4, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd4Q9QY39 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzd4Q9QY39 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzd4Q9QY39 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pdzd4Q9QY39 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Pdzd4Q9QY39 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzd4Q9QY39 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzd4Q9QY39 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdzd4Q9QY39 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.23■□□□□ 0.83
Pdzd4Q9QY39 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdzd4Q9QY39 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pdzd4Q9QY39 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.23■□□□□ 0.83
Pdzd4Q9QY39 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdzd4Q9QY39 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.23■□□□□ 0.83
Pdzd4Q9QY39 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.23■□□□□ 0.83
Pdzd4Q9QY39 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdzd4Q9QY39 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdzd4Q9QY39 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdzd4Q9QY39 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdzd4Q9QY39 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdzd4Q9QY39 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pdzd4Q9QY39 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzd4Q9QY39 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzd4Q9QY39 Gm13146-201ENSMUST00000118508 780 ntBASIC20.2■□□□□ 0.82
Pdzd4Q9QY39 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.2■□□□□ 0.82
Pdzd4Q9QY39 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzd4Q9QY39 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzd4Q9QY39 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdzd4Q9QY39 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Pdzd4Q9QY39 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pdzd4Q9QY39 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzd4Q9QY39 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzd4Q9QY39 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.18■□□□□ 0.82
Pdzd4Q9QY39 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.18■□□□□ 0.82
Pdzd4Q9QY39 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzd4Q9QY39 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzd4Q9QY39 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzd4Q9QY39 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pdzd4Q9QY39 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pdzd4Q9QY39 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pdzd4Q9QY39 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdzd4Q9QY39 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pdzd4Q9QY39 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdzd4Q9QY39 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdzd4Q9QY39 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pdzd4Q9QY39 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.17■□□□□ 0.82
Pdzd4Q9QY39 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdzd4Q9QY39 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdzd4Q9QY39 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdzd4Q9QY39 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdzd4Q9QY39 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdzd4Q9QY39 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Pdzd4Q9QY39 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdzd4Q9QY39 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pdzd4Q9QY39 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Pdzd4Q9QY39 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pdzd4Q9QY39 Gm7860-201ENSMUST00000121190 879 ntBASIC20.16■□□□□ 0.82
Pdzd4Q9QY39 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdzd4Q9QY39 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms