Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ClpxQ9JHS4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClpxQ9JHS4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ClpxQ9JHS4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
ClpxQ9JHS4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
ClpxQ9JHS4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ClpxQ9JHS4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Gm27454-201ENSMUST00000185090 204 ntBASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClpxQ9JHS4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClpxQ9JHS4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.11■□□□□ 0.33
ClpxQ9JHS4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ClpxQ9JHS4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Gm43137-201ENSMUST00000198052 594 ntBASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ClpxQ9JHS4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ClpxQ9JHS4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClpxQ9JHS4 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.09■□□□□ 0.33
ClpxQ9JHS4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClpxQ9JHS4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ClpxQ9JHS4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ClpxQ9JHS4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms