Protein–RNA interactions for Protein: Q9ER63

Tnfrsf23, Tumor necrosis factor receptor superfamily member 23, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf23Q9ER63 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf23Q9ER63 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.17□□□□□ -0.14
Tnfrsf23Q9ER63 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.17□□□□□ -0.14
Tnfrsf23Q9ER63 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf23Q9ER63 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf23Q9ER63 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf23Q9ER63 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Tnfrsf23Q9ER63 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf23Q9ER63 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.17□□□□□ -0.14
Tnfrsf23Q9ER63 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Tnfrsf23Q9ER63 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Gm13234-201ENSMUST00000120010 747 ntBASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Gm7291-201ENSMUST00000199147 382 ntBASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 AV356131-201ENSMUST00000206201 750 ntBASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf23Q9ER63 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 Gm27405-201ENSMUST00000184201 112 ntBASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf23Q9ER63 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf23Q9ER63 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfrsf23Q9ER63 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms