Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Cpne8Q9DC53 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cpne8Q9DC53 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpne8Q9DC53 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.68■□□□□ 0.74
Cpne8Q9DC53 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cpne8Q9DC53 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cpne8Q9DC53 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne8Q9DC53 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpne8Q9DC53 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cpne8Q9DC53 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpne8Q9DC53 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cpne8Q9DC53 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpne8Q9DC53 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpne8Q9DC53 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cpne8Q9DC53 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.65■□□□□ 0.74
Cpne8Q9DC53 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cpne8Q9DC53 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpne8Q9DC53 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cpne8Q9DC53 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cpne8Q9DC53 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cpne8Q9DC53 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cpne8Q9DC53 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cpne8Q9DC53 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cpne8Q9DC53 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpne8Q9DC53 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpne8Q9DC53 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
Cpne8Q9DC53 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.64■□□□□ 0.73
Cpne8Q9DC53 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cpne8Q9DC53 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cpne8Q9DC53 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cpne8Q9DC53 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpne8Q9DC53 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpne8Q9DC53 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpne8Q9DC53 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpne8Q9DC53 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpne8Q9DC53 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cpne8Q9DC53 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.63■□□□□ 0.73
Cpne8Q9DC53 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cpne8Q9DC53 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpne8Q9DC53 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpne8Q9DC53 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cpne8Q9DC53 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cpne8Q9DC53 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpne8Q9DC53 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cpne8Q9DC53 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpne8Q9DC53 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.62■□□□□ 0.73
Cpne8Q9DC53 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.62■□□□□ 0.73
Cpne8Q9DC53 Gm43060-201ENSMUST00000200621 289 ntBASIC19.62■□□□□ 0.73
Cpne8Q9DC53 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Cpne8Q9DC53 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpne8Q9DC53 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpne8Q9DC53 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpne8Q9DC53 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms