Protein–RNA interactions for Protein: Q9DBN9

Ddx59, Probable ATP-dependent RNA helicase DDX59, mousemouse

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx59Q9DBN9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx59Q9DBN9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx59Q9DBN9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx59Q9DBN9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx59Q9DBN9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx59Q9DBN9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx59Q9DBN9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx59Q9DBN9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx59Q9DBN9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx59Q9DBN9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx59Q9DBN9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Ddx59Q9DBN9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx59Q9DBN9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx59Q9DBN9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx59Q9DBN9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx59Q9DBN9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ddx59Q9DBN9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx59Q9DBN9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx59Q9DBN9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Ddx59Q9DBN9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ddx59Q9DBN9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx59Q9DBN9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx59Q9DBN9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx59Q9DBN9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms