Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Nkiras2Q9CR56 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkiras2Q9CR56 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Nkiras2Q9CR56 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkiras2Q9CR56 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkiras2Q9CR56 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkiras2Q9CR56 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkiras2Q9CR56 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkiras2Q9CR56 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkiras2Q9CR56 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Nkiras2Q9CR56 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.92■□□□□ 0.3
Nkiras2Q9CR56 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkiras2Q9CR56 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Spcs1-204ENSMUST00000226782 949 ntBASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nkiras2Q9CR56 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkiras2Q9CR56 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Mir7075-201ENSMUST00000184187 82 ntBASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkiras2Q9CR56 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Gm45417-201ENSMUST00000209533 758 ntBASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nkiras2Q9CR56 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkiras2Q9CR56 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms