Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Q9CR55 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
Q9CR55 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Q9CR55 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.39■□□□□ 0.37
Q9CR55 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Q9CR55 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.39■□□□□ 0.37
Q9CR55 Rps24-207ENSMUST00000224568 714 ntBASIC17.39■□□□□ 0.37
Q9CR55 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CR55 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CR55 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CR55 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CR55 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Q9CR55 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CR55 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CR55 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CR55 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CR55 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CR55 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CR55 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CR55 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.38■□□□□ 0.37
Q9CR55 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CR55 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Q9CR55 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Q9CR55 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.37■□□□□ 0.37
Q9CR55 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Q9CR55 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.37■□□□□ 0.37
Q9CR55 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.37■□□□□ 0.37
Q9CR55 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Q9CR55 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CR55 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.37■□□□□ 0.37
Q9CR55 Haglr-201ENSMUST00000100000 2085 ntBASIC17.36■□□□□ 0.37
Q9CR55 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Q9CR55 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CR55 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CR55 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CR55 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CR55 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Q9CR55 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CR55 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CR55 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CR55 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.36■□□□□ 0.37
Q9CR55 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CR55 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CR55 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CR55 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CR55 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Q9CR55 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.36■□□□□ 0.37
Q9CR55 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Q9CR55 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Q9CR55 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Q9CR55 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Q9CR55 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Q9CR55 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Q9CR55 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.35■□□□□ 0.37
Q9CR55 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CR55 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.34■□□□□ 0.37
Q9CR55 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Q9CR55 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CR55 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CR55 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.34■□□□□ 0.37
Q9CR55 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms