Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CQC3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CQC3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CQC3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CQC3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CQC3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CQC3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CQC3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CQC3 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.6■□□□□ 0.73
Q9CQC3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Q9CQC3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CQC3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CQC3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.6■□□□□ 0.73
Q9CQC3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CQC3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CQC3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CQC3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CQC3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CQC3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CQC3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.59■□□□□ 0.73
Q9CQC3 Gm13534-201ENSMUST00000121169 513 ntBASIC19.59■□□□□ 0.73
Q9CQC3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.59■□□□□ 0.73
Q9CQC3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.59■□□□□ 0.73
Q9CQC3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Q9CQC3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CQC3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CQC3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CQC3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CQC3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CQC3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CQC3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Q9CQC3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q9CQC3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q9CQC3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q9CQC3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q9CQC3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Q9CQC3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q9CQC3 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.58■□□□□ 0.72
Q9CQC3 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.58■□□□□ 0.72
Q9CQC3 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.58■□□□□ 0.72
Q9CQC3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Q9CQC3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q9CQC3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q9CQC3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q9CQC3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Q9CQC3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q9CQC3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q9CQC3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Q9CQC3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Q9CQC3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Q9CQC3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q9CQC3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q9CQC3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9CQC3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9CQC3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9CQC3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Q9CQC3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9CQC3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9CQC3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9CQC3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9CQC3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.57■□□□□ 0.72
Q9CQC3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Q9CQC3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9CQC3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9CQC3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CQC3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CQC3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CQC3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CQC3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.56■□□□□ 0.72
Q9CQC3 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.56■□□□□ 0.72
Q9CQC3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.56■□□□□ 0.72
Q9CQC3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Q9CQC3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CQC3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.56■□□□□ 0.72
Q9CQC3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CQC3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CQC3 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.56■□□□□ 0.72
Q9CQC3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CQC3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.56■□□□□ 0.72
Q9CQC3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CQC3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CQC3 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.55■□□□□ 0.72
Q9CQC3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CQC3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Q9CQC3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CQC3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CQC3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.55■□□□□ 0.72
Q9CQC3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.55■□□□□ 0.72
Q9CQC3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CQC3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CQC3 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.54■□□□□ 0.72
Q9CQC3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CQC3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CQC3 Gm42778-201ENSMUST00000199644 553 ntBASIC19.54■□□□□ 0.72
Q9CQC3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.54■□□□□ 0.72
Q9CQC3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CQC3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CQC3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CQC3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CQC3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms