Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim8Q99PJ2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim8Q99PJ2 Gm15039-201ENSMUST00000118914 875 ntBASIC18.39■□□□□ 0.53
Trim8Q99PJ2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim8Q99PJ2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim8Q99PJ2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim8Q99PJ2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim8Q99PJ2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim8Q99PJ2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim8Q99PJ2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim8Q99PJ2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Gm13241-201ENSMUST00000094493 780 ntBASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim8Q99PJ2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim8Q99PJ2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim8Q99PJ2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim8Q99PJ2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim8Q99PJ2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim8Q99PJ2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim8Q99PJ2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim8Q99PJ2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trim8Q99PJ2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim8Q99PJ2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim8Q99PJ2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim8Q99PJ2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim8Q99PJ2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms