Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.56■□□□□ 0.72
Col25a1Q99MQ5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col25a1Q99MQ5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col25a1Q99MQ5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.56■□□□□ 0.72
Col25a1Q99MQ5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Col25a1Q99MQ5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col25a1Q99MQ5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col25a1Q99MQ5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col25a1Q99MQ5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col25a1Q99MQ5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col25a1Q99MQ5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.55■□□□□ 0.72
Col25a1Q99MQ5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col25a1Q99MQ5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col25a1Q99MQ5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col25a1Q99MQ5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col25a1Q99MQ5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col25a1Q99MQ5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col25a1Q99MQ5 Gm30025-201ENSMUST00000218555 728 ntBASIC19.54■□□□□ 0.72
Col25a1Q99MQ5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Col25a1Q99MQ5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col25a1Q99MQ5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col25a1Q99MQ5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col25a1Q99MQ5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col25a1Q99MQ5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col25a1Q99MQ5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Gm14859-201ENSMUST00000117752 357 ntBASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Col25a1Q99MQ5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col25a1Q99MQ5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col25a1Q99MQ5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col25a1Q99MQ5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col25a1Q99MQ5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.52■□□□□ 0.72
Col25a1Q99MQ5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col25a1Q99MQ5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col25a1Q99MQ5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col25a1Q99MQ5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col25a1Q99MQ5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Col25a1Q99MQ5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col25a1Q99MQ5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col25a1Q99MQ5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col25a1Q99MQ5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col25a1Q99MQ5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col25a1Q99MQ5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Col25a1Q99MQ5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col25a1Q99MQ5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col25a1Q99MQ5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col25a1Q99MQ5 Gm13559-201ENSMUST00000120476 863 ntBASIC19.5■□□□□ 0.71
Col25a1Q99MQ5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col25a1Q99MQ5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col25a1Q99MQ5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.5■□□□□ 0.71
Col25a1Q99MQ5 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.5■□□□□ 0.71
Col25a1Q99MQ5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col25a1Q99MQ5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col25a1Q99MQ5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col25a1Q99MQ5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col25a1Q99MQ5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Col25a1Q99MQ5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col25a1Q99MQ5 AA414768-201ENSMUST00000121924 1257 ntBASIC19.49■□□□□ 0.71
Col25a1Q99MQ5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col25a1Q99MQ5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col25a1Q99MQ5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col25a1Q99MQ5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.49■□□□□ 0.71
Col25a1Q99MQ5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col25a1Q99MQ5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col25a1Q99MQ5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.48■□□□□ 0.71
Col25a1Q99MQ5 Gm10013-201ENSMUST00000106074 672 ntBASIC19.48■□□□□ 0.71
Col25a1Q99MQ5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col25a1Q99MQ5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col25a1Q99MQ5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.48■□□□□ 0.71
Col25a1Q99MQ5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col25a1Q99MQ5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col25a1Q99MQ5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Col25a1Q99MQ5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col25a1Q99MQ5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col25a1Q99MQ5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col25a1Q99MQ5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col25a1Q99MQ5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.47■□□□□ 0.71
Col25a1Q99MQ5 Gm7889-201ENSMUST00000185591 958 ntBASIC19.47■□□□□ 0.71
Col25a1Q99MQ5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.47■□□□□ 0.71
Col25a1Q99MQ5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col25a1Q99MQ5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col25a1Q99MQ5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col25a1Q99MQ5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col25a1Q99MQ5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms