Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcc1Q99LI2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.59■□□□□ 0.57
Clcc1Q99LI2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.59■□□□□ 0.57
Clcc1Q99LI2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcc1Q99LI2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcc1Q99LI2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcc1Q99LI2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clcc1Q99LI2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clcc1Q99LI2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.58■□□□□ 0.57
Clcc1Q99LI2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcc1Q99LI2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcc1Q99LI2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcc1Q99LI2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcc1Q99LI2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcc1Q99LI2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcc1Q99LI2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcc1Q99LI2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcc1Q99LI2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcc1Q99LI2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clcc1Q99LI2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcc1Q99LI2 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.57■□□□□ 0.56
Clcc1Q99LI2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Clcc1Q99LI2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clcc1Q99LI2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clcc1Q99LI2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.57■□□□□ 0.56
Clcc1Q99LI2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcc1Q99LI2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcc1Q99LI2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Clcc1Q99LI2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcc1Q99LI2 Gm6211-202ENSMUST00000167849 925 ntBASIC18.56■□□□□ 0.56
Clcc1Q99LI2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcc1Q99LI2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Clcc1Q99LI2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.56■□□□□ 0.56
Clcc1Q99LI2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcc1Q99LI2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcc1Q99LI2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcc1Q99LI2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clcc1Q99LI2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.56■□□□□ 0.56
Clcc1Q99LI2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcc1Q99LI2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clcc1Q99LI2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcc1Q99LI2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Clcc1Q99LI2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcc1Q99LI2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Clcc1Q99LI2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcc1Q99LI2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcc1Q99LI2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcc1Q99LI2 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.53■□□□□ 0.56
Clcc1Q99LI2 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.53■□□□□ 0.56
Clcc1Q99LI2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcc1Q99LI2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.53■□□□□ 0.56
Clcc1Q99LI2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcc1Q99LI2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcc1Q99LI2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcc1Q99LI2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcc1Q99LI2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.52■□□□□ 0.56
Clcc1Q99LI2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.52■□□□□ 0.56
Clcc1Q99LI2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
Clcc1Q99LI2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcc1Q99LI2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms