Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha8Q91Y12 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha8Q91Y12 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha8Q91Y12 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdha8Q91Y12 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha8Q91Y12 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha8Q91Y12 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha8Q91Y12 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Pcdha8Q91Y12 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha8Q91Y12 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.27■□□□□ 0.52
Pcdha8Q91Y12 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha8Q91Y12 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha8Q91Y12 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha8Q91Y12 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha8Q91Y12 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
Pcdha8Q91Y12 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha8Q91Y12 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha8Q91Y12 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha8Q91Y12 Gm7860-201ENSMUST00000121190 879 ntBASIC18.26■□□□□ 0.51
Pcdha8Q91Y12 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha8Q91Y12 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdha8Q91Y12 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdha8Q91Y12 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha8Q91Y12 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha8Q91Y12 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha8Q91Y12 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha8Q91Y12 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Pcdha8Q91Y12 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha8Q91Y12 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha8Q91Y12 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha8Q91Y12 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha8Q91Y12 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha8Q91Y12 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha8Q91Y12 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha8Q91Y12 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdha8Q91Y12 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha8Q91Y12 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdha8Q91Y12 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha8Q91Y12 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha8Q91Y12 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.23■□□□□ 0.51
Pcdha8Q91Y12 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha8Q91Y12 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdha8Q91Y12 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdha8Q91Y12 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha8Q91Y12 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcdha8Q91Y12 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha8Q91Y12 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Pcdha8Q91Y12 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha8Q91Y12 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdha8Q91Y12 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha8Q91Y12 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha8Q91Y12 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.21■□□□□ 0.51
Pcdha8Q91Y12 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms