Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb3Q91XZ7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb3Q91XZ7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb3Q91XZ7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb3Q91XZ7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb3Q91XZ7 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.71■□□□□ 0.59
Pcdhb3Q91XZ7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.71■□□□□ 0.58
Pcdhb3Q91XZ7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb3Q91XZ7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb3Q91XZ7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Gm45417-201ENSMUST00000209533 758 ntBASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb3Q91XZ7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.67■□□□□ 0.58
Pcdhb3Q91XZ7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.67■□□□□ 0.58
Pcdhb3Q91XZ7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb3Q91XZ7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb3Q91XZ7 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.67■□□□□ 0.58
Pcdhb3Q91XZ7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhb3Q91XZ7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhb3Q91XZ7 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.67■□□□□ 0.58
Pcdhb3Q91XZ7 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.67■□□□□ 0.58
Pcdhb3Q91XZ7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb3Q91XZ7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Gm37444-201ENSMUST00000193605 439 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms