Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb6Q91XZ4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb6Q91XZ4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdhb6Q91XZ4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
Pcdhb6Q91XZ4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb6Q91XZ4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb6Q91XZ4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb6Q91XZ4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb6Q91XZ4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb6Q91XZ4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb6Q91XZ4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb6Q91XZ4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb6Q91XZ4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb6Q91XZ4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb6Q91XZ4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb6Q91XZ4 Gm10493-201ENSMUST00000097270 612 ntBASIC19.38■□□□□ 0.69
Pcdhb6Q91XZ4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb6Q91XZ4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb6Q91XZ4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb6Q91XZ4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb6Q91XZ4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Pcdhb6Q91XZ4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb6Q91XZ4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb6Q91XZ4 Gm13234-201ENSMUST00000120010 747 ntBASIC19.36■□□□□ 0.69
Pcdhb6Q91XZ4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdhb6Q91XZ4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb6Q91XZ4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb6Q91XZ4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb6Q91XZ4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Gm13534-201ENSMUST00000121169 513 ntBASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb6Q91XZ4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb6Q91XZ4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb6Q91XZ4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb6Q91XZ4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Pcdhb6Q91XZ4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb6Q91XZ4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Pcdhb6Q91XZ4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb6Q91XZ4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb6Q91XZ4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb6Q91XZ4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb6Q91XZ4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb6Q91XZ4 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.33■□□□□ 0.68
Pcdhb6Q91XZ4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb6Q91XZ4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhb6Q91XZ4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb6Q91XZ4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb6Q91XZ4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb6Q91XZ4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms