Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhgb4Q91XX6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhgb4Q91XX6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhgb4Q91XX6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb4Q91XX6 Gm43060-201ENSMUST00000200621 289 ntBASIC19.9■□□□□ 0.78
Pcdhgb4Q91XX6 Gm42790-201ENSMUST00000201268 969 ntBASIC19.9■□□□□ 0.78
Pcdhgb4Q91XX6 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.9■□□□□ 0.78
Pcdhgb4Q91XX6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhgb4Q91XX6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb4Q91XX6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb4Q91XX6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb4Q91XX6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb4Q91XX6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb4Q91XX6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdhgb4Q91XX6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb4Q91XX6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb4Q91XX6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb4Q91XX6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.89■□□□□ 0.77
Pcdhgb4Q91XX6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhgb4Q91XX6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhgb4Q91XX6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb4Q91XX6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.89■□□□□ 0.77
Pcdhgb4Q91XX6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdhgb4Q91XX6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdhgb4Q91XX6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb4Q91XX6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb4Q91XX6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgb4Q91XX6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdhgb4Q91XX6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgb4Q91XX6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Pcdhgb4Q91XX6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgb4Q91XX6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcdhgb4Q91XX6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgb4Q91XX6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgb4Q91XX6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgb4Q91XX6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgb4Q91XX6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgb4Q91XX6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb4Q91XX6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb4Q91XX6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb4Q91XX6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb4Q91XX6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb4Q91XX6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.87■□□□□ 0.77
Pcdhgb4Q91XX6 Gm38205-201ENSMUST00000192243 258 ntBASIC19.87■□□□□ 0.77
Pcdhgb4Q91XX6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb4Q91XX6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb4Q91XX6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb4Q91XX6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.87■□□□□ 0.77
Pcdhgb4Q91XX6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb4Q91XX6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb4Q91XX6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhgb4Q91XX6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms