Protein–RNA interactions for Protein: Q91WU4

Tmco4, Transmembrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmco4Q91WU4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmco4Q91WU4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmco4Q91WU4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmco4Q91WU4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Tmco4Q91WU4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.71■□□□□ 0.91
Tmco4Q91WU4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.7■□□□□ 0.9
Tmco4Q91WU4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tmco4Q91WU4 Gm12896-201ENSMUST00000118430 226 ntBASIC20.7■□□□□ 0.9
Tmco4Q91WU4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tmco4Q91WU4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.69■□□□□ 0.9
Tmco4Q91WU4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tmco4Q91WU4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tmco4Q91WU4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tmco4Q91WU4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.69■□□□□ 0.9
Tmco4Q91WU4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tmco4Q91WU4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tmco4Q91WU4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tmco4Q91WU4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tmco4Q91WU4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tmco4Q91WU4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmco4Q91WU4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmco4Q91WU4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tmco4Q91WU4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tmco4Q91WU4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tmco4Q91WU4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tmco4Q91WU4 Gm10812-201ENSMUST00000099864 546 ntBASIC20.66■□□□□ 0.9
Tmco4Q91WU4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Tmco4Q91WU4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Tmco4Q91WU4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tmco4Q91WU4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tmco4Q91WU4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tmco4Q91WU4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tmco4Q91WU4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tmco4Q91WU4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tmco4Q91WU4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tmco4Q91WU4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tmco4Q91WU4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Tmco4Q91WU4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tmco4Q91WU4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Tmco4Q91WU4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tmco4Q91WU4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tmco4Q91WU4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Tmco4Q91WU4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tmco4Q91WU4 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.64■□□□□ 0.89
Tmco4Q91WU4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.64■□□□□ 0.89
Tmco4Q91WU4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tmco4Q91WU4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tmco4Q91WU4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tmco4Q91WU4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tmco4Q91WU4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.63■□□□□ 0.89
Tmco4Q91WU4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.63■□□□□ 0.89
Tmco4Q91WU4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.63■□□□□ 0.89
Tmco4Q91WU4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tmco4Q91WU4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tmco4Q91WU4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tmco4Q91WU4 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.62■□□□□ 0.89
Tmco4Q91WU4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms