Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.46■□□□□ 0.71
Pcdhb17Q91VD8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb17Q91VD8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pcdhb17Q91VD8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb17Q91VD8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb17Q91VD8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhb17Q91VD8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.46■□□□□ 0.71
Pcdhb17Q91VD8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb17Q91VD8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb17Q91VD8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb17Q91VD8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 Gm6420-201ENSMUST00000193885 723 ntBASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb17Q91VD8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Gm37179-201ENSMUST00000194862 823 ntBASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Gm44711-201ENSMUST00000205414 1264 ntBASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb17Q91VD8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb17Q91VD8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb17Q91VD8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb17Q91VD8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb17Q91VD8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb17Q91VD8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcdhb17Q91VD8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhb17Q91VD8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb17Q91VD8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb17Q91VD8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Nespas-201ENSMUST00000143738 1083 ntBASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb17Q91VD8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb17Q91VD8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pcdhb17Q91VD8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb17Q91VD8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.4■□□□□ 0.7
Pcdhb17Q91VD8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb17Q91VD8 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.4■□□□□ 0.7
Pcdhb17Q91VD8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb17Q91VD8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb17Q91VD8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb17Q91VD8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb17Q91VD8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb17Q91VD8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.39■□□□□ 0.69
Pcdhb17Q91VD8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhb17Q91VD8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb17Q91VD8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb17Q91VD8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb17Q91VD8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb17Q91VD8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb17Q91VD8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb17Q91VD8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb17Q91VD8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb17Q91VD8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms