Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tram1Q91V04 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tram1Q91V04 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tram1Q91V04 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.22■□□□□ 0.19
Tram1Q91V04 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.22■□□□□ 0.19
Tram1Q91V04 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.22■□□□□ 0.19
Tram1Q91V04 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tram1Q91V04 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tram1Q91V04 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.22■□□□□ 0.19
Tram1Q91V04 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.22■□□□□ 0.19
Tram1Q91V04 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Tram1Q91V04 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tram1Q91V04 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tram1Q91V04 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tram1Q91V04 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.22■□□□□ 0.19
Tram1Q91V04 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tram1Q91V04 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tram1Q91V04 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tram1Q91V04 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tram1Q91V04 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.21■□□□□ 0.19
Tram1Q91V04 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tram1Q91V04 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tram1Q91V04 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.21■□□□□ 0.19
Tram1Q91V04 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tram1Q91V04 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tram1Q91V04 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tram1Q91V04 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.2■□□□□ 0.18
Tram1Q91V04 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tram1Q91V04 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tram1Q91V04 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tram1Q91V04 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tram1Q91V04 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tram1Q91V04 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tram1Q91V04 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.2■□□□□ 0.18
Tram1Q91V04 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tram1Q91V04 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tram1Q91V04 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tram1Q91V04 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.2■□□□□ 0.18
Tram1Q91V04 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Tram1Q91V04 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Tram1Q91V04 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tram1Q91V04 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tram1Q91V04 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tram1Q91V04 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tram1Q91V04 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tram1Q91V04 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tram1Q91V04 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tram1Q91V04 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tram1Q91V04 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tram1Q91V04 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tram1Q91V04 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tram1Q91V04 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tram1Q91V04 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Tram1Q91V04 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tram1Q91V04 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.19■□□□□ 0.18
Tram1Q91V04 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tram1Q91V04 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tram1Q91V04 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tram1Q91V04 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.19■□□□□ 0.18
Tram1Q91V04 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Tram1Q91V04 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.18■□□□□ 0.18
Tram1Q91V04 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
Tram1Q91V04 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tram1Q91V04 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.17■□□□□ 0.18
Tram1Q91V04 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Gm13238-201ENSMUST00000117655 780 ntBASIC16.17■□□□□ 0.18
Tram1Q91V04 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.17■□□□□ 0.18
Tram1Q91V04 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.17■□□□□ 0.18
Tram1Q91V04 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tram1Q91V04 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms