Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh18Q8VHR0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh18Q8VHR0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdh18Q8VHR0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh18Q8VHR0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh18Q8VHR0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh18Q8VHR0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdh18Q8VHR0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh18Q8VHR0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh18Q8VHR0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh18Q8VHR0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Pcdh18Q8VHR0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh18Q8VHR0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Golgb1-201ENSMUST00000023534 498 ntBASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh18Q8VHR0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Gm12922-201ENSMUST00000120626 809 ntBASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh18Q8VHR0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh18Q8VHR0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh18Q8VHR0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh18Q8VHR0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms