Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpa1Q8VEE4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.91■□□□□ 0.62
Rpa1Q8VEE4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa1Q8VEE4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa1Q8VEE4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa1Q8VEE4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa1Q8VEE4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa1Q8VEE4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa1Q8VEE4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa1Q8VEE4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpa1Q8VEE4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rpa1Q8VEE4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rpa1Q8VEE4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpa1Q8VEE4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpa1Q8VEE4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpa1Q8VEE4 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.88■□□□□ 0.61
Rpa1Q8VEE4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.88■□□□□ 0.61
Rpa1Q8VEE4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpa1Q8VEE4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpa1Q8VEE4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpa1Q8VEE4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpa1Q8VEE4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpa1Q8VEE4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpa1Q8VEE4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Rpa1Q8VEE4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpa1Q8VEE4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.87■□□□□ 0.61
Rpa1Q8VEE4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpa1Q8VEE4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpa1Q8VEE4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpa1Q8VEE4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpa1Q8VEE4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.87■□□□□ 0.61
Rpa1Q8VEE4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpa1Q8VEE4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rpa1Q8VEE4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpa1Q8VEE4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpa1Q8VEE4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpa1Q8VEE4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpa1Q8VEE4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpa1Q8VEE4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpa1Q8VEE4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpa1Q8VEE4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rpa1Q8VEE4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpa1Q8VEE4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpa1Q8VEE4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms