Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Swsap1Q8VCI7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Swsap1Q8VCI7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.95■□□□□ 0.3
Swsap1Q8VCI7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Swsap1Q8VCI7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Swsap1Q8VCI7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Swsap1Q8VCI7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Swsap1Q8VCI7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Swsap1Q8VCI7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Swsap1Q8VCI7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Swsap1Q8VCI7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Swsap1Q8VCI7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Swsap1Q8VCI7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
Swsap1Q8VCI7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Swsap1Q8VCI7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Swsap1Q8VCI7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 Gm37179-201ENSMUST00000194862 823 ntBASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Swsap1Q8VCI7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Swsap1Q8VCI7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Swsap1Q8VCI7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Swsap1Q8VCI7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Swsap1Q8VCI7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.89■□□□□ 0.29
Swsap1Q8VCI7 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.89■□□□□ 0.29
Swsap1Q8VCI7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.89■□□□□ 0.29
Swsap1Q8VCI7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.89■□□□□ 0.29
Swsap1Q8VCI7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Swsap1Q8VCI7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms