Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc1Q8VCB1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc1Q8VCB1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc1Q8VCB1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc1Q8VCB1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Gm7290-201ENSMUST00000104990 617 ntBASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Gm12918-201ENSMUST00000120234 636 ntBASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Gm15710-201ENSMUST00000121821 636 ntBASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Gm5075-201ENSMUST00000196916 622 ntBASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc1Q8VCB1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc1Q8VCB1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc1Q8VCB1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.66■□□□□ 0.42
Ndc1Q8VCB1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc1Q8VCB1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc1Q8VCB1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc1Q8VCB1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc1Q8VCB1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc1Q8VCB1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc1Q8VCB1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms