Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Vps39Q8R5L3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps39Q8R5L3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.86■□□□□ 0.61
Vps39Q8R5L3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps39Q8R5L3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps39Q8R5L3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps39Q8R5L3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Vps39Q8R5L3 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.84■□□□□ 0.61
Vps39Q8R5L3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.84■□□□□ 0.61
Vps39Q8R5L3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Vps39Q8R5L3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Vps39Q8R5L3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Vps39Q8R5L3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Vps39Q8R5L3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps39Q8R5L3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps39Q8R5L3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vps39Q8R5L3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps39Q8R5L3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Vps39Q8R5L3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps39Q8R5L3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps39Q8R5L3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Vps39Q8R5L3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.83■□□□□ 0.61
Vps39Q8R5L3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.83■□□□□ 0.61
Vps39Q8R5L3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Vps39Q8R5L3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps39Q8R5L3 Gm6139-201ENSMUST00000079261 882 ntBASIC18.83■□□□□ 0.6
Vps39Q8R5L3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps39Q8R5L3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Vps39Q8R5L3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps39Q8R5L3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.82■□□□□ 0.6
Vps39Q8R5L3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps39Q8R5L3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps39Q8R5L3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps39Q8R5L3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps39Q8R5L3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps39Q8R5L3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Vps39Q8R5L3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vps39Q8R5L3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Gm7860-201ENSMUST00000121190 879 ntBASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Gm26833-201ENSMUST00000180899 440 ntBASIC18.81■□□□□ 0.6
Vps39Q8R5L3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps39Q8R5L3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Gm45417-201ENSMUST00000209533 758 ntBASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps39Q8R5L3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms